Ketamine distribution in the brain: understanding drug metabolism with SIRIUS

Ketamine is known for its dual role as an anesthetic and an emerging antidepressant. Despite its long-standing clinical use, the metabolic pathways and pharmacokinetics of ketamine remain poorly understood. A study of ketamine metabolism in the pig brain using SIRIUS provides valuable insights into the distribution of ketamine and its metabolites in different areas of the brain.
Ketamine’s potential for treating neurological diseases such as depression, PTSD, and chronic pain has sparked significant interest within the medical and scientific communities. (Photo by Robina Weermeijer on Unsplash.)
Ketamine’s potential for treating neurological diseases such as depression, PTSD, and chronic pain has sparked significant interest within the medical and scientific communities. (Photo by Robina Weermeijer on Unsplash.)

Ketamine, the anesthetic

Ketamine is a dissociative anesthetic widely used in both human and veterinary medicine. It was derived from phencyclidine in 1962 in pursuit of a safer anesthetic with reduced hallucinogenic effects​1,2​. Known for its rapid action, ketamine induces a trance-like state, including pain relief, sedation, and memory loss. It has been a staple in surgical procedures and emergency medicine for several decades​3​.  The anesthetic and analgesic properties of ketamine are primarily mediated through its antagonism of the N-methyl-D-aspartate (NMDA) receptor.

Ketamine, the antidepressant

Ketamine’s potential for treating neurological diseases such as depression, PTSD, and chronic pain has sparked significant interest within the medical and scientific communities. Administered at subanesthetic doses it offers a promising alternative to treat major depressive disorders​4–6​. Researchers are currently investigating the mechanisms underlying ketamine’s antidepressant effects in the brain and suggested a number of different mechanisms for its antidepressant pharmacological profile​3,7,8​.

Structure and metabolism

Ketamine is a chiral compound with two enantiomers: esketamine (S-ketamine) and arketamine (R-ketamine).
Ketamine is a chiral compound with two enantiomers: esketamine (S-ketamine) and arketamine (R-ketamine).

Ketamine has a chlorophenyl scaffold substituted with 2-methylamino cyclohexanone and is a chiral compound with two enantiomers: esketamine (S-ketamine) and arketamine (R-ketamine). Esketamine has higher analgesic and anesthetic effects and causes fewer psychotic and other adverse effects​9​.

Although both enantiomers have been shown to exhibit antidepressant outcomes​10​,  arketamine is recognized for its longer-lasting antidepressant effects​11​

Although ketamine has been used clinically for more than six decades, its metabolic pathways and pharmacological profile are still not fully understood. These gaps in knowledge make it difficult to accurately predict its effects and hinder the optimisation of its therapeutic potential. Major metabolites of ketamine have been identified​12,13​, and there is increasing evidence that the antidepressant effects of ketamine may be mediated by its metabolites​14–17​. Understanding the role and mechanisms of these metabolites may be critical to improving the efficacy of ketamine in the treatment of depression and potentially other disorders, opening new avenues for its clinical use and therapeutic refinement.

Mapping ketamine in the pig brain

A research team around Daniel Globisch at Uppsala University and Iben Lundgaard at Lund University has investigated ketamine metabolism and the distribution of ketamine metabolites in the pig brain​18​. The study focuses on 12 anatomically distinct brain regions, along with plasma samples from blood vessels circulating blood from and to the brain, as well as cerebrospinal fluid. Using ultraperformance liquid chromatography–mass spectrometry they map the neuro-distribution profile of ketamine, providing crucial insights into how this drug permeates and acts within different areas of the brain.

Ketamine metabolites in the pig brain

Using SIRIUS, the researchers were able to detect and identify numerous phase I and phase II metabolites of ketamine, including five metabolites that they described in vivo for the first time in this study:

  • phenol-hydroxy-nKET and dihydroxy-nKET were previously detected in another study but not structurally elucidated​13​. This study successfully determined their structure. 
  • 5,6-dehydro-nKET-r shares the same molecular formula as nKET, but exhibits a distinct retention time. Further analysis confirmed its core structure as being derived from ketamine with a reduced carbonyl. 
  • OH-5,6-dehydro-nKET was identified as a hydroxylated analogue of 5,6-dehydro-nKET. 
  • OH-5,6-dehydro-nKET-Gluc is a newly identified phase II metabolite, which originated from OH-5,6-dehydro-nKET.

Neuro-distribution profile

Brain regions in the human brain, including choroid plexus and the pituitary gland. (Image by BruceBlaus on Wikimedia Commons under CC BY-SA 4.0 DEED.)
Brain regions in the human brain, including choroid plexus and the pituitary gland. (Image by BruceBlaus on Wikimedia Commons under CC BY-SA 4.0 DEED.)

The investigation into the distribution of ketamine and its metabolites in the pig brain revealed significant regional differences, particularly in the levels of phase II metabolites. For the phase I metabolites, there was a high correlation between plasma, cerebrospinal fluid, and brain tissue, indicating their ability to traverse the blood-brain barrier effectively.

Ketamine and norketamine were found to distribute unspecifically, while their glucuronidated phase II metabolites were predominantly concentrated in the choroid plexus and the pituitary gland. Those two brain regions were the ones that differed from the other ten regions. Both regions are linked to the clearance of metabolites from the brain. The choroid plexus plays a crucial role in the production and secretion of cerebrospinal fluid. The pituitary gland, also known as the hypophysis, is an endocrine gland that controls several hormone glands in the body and plays a crucial role in regulating vital body functions and general wellbeing. The accumulation of hydrophilic glucuronidated ketamine metabolites in these regions suggests a targeted pathway that could be leveraged for developing more effective treatments for neurological disorders. 


References

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The easy way to comprehensive structure elucidation​

SIRIUS is proven to be the best computational method for identifying molecules from tandem mass spectrometry data. SIRIUS is the umbrella application comprising molecular formula identification (ZODIAC), structure database search (CSI:FingerID), confidence score assignment (COSMIC) and compound class prediction (CANOPUS).​

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