Bringing structure to your spectra.
Profound algorithms and state-of-the-art machine learning meet enterprise software solutions for your metabolomics MS/MS analysis.
How it works
Solutions
CSI:FingerID - SaaS offering with private resources
Get your own CSI:FingerID hosting with the computational power that fits your needs:
- get started almost immediately
- private CPU cores exclusively for your jobs.
- scalable computing resources
- your data will be processed on our servers
CSI:FingerID - dedicated server in your private network
Get your own dedicated ready-to-run CSI:FingerID server for use in your internal network:
- keep your data within your internal network
- the scaling of computing resources requires new hardware
- configuration and delivery time required
Customized CSI:FingerID solutions
Get your personalized structure elucidation workflow including:
- CSI:FingerID trained on your reference spectral libraries
- custom fingerprint models
- custom tailored workflows and reporting
For further information, detailed offerings and pricing:
What is SIRIUS+CSI:FIngerID?
SIRIUS+CSI:FingerID greatly facilitate structure elucidation of small molecules — such as metabolites — measured by tandem mass spectrometry. Both are based on cutting edge academical research and offers superb performance.
SIRIUS is an open-source software which annotates measured compounds and their corresponding fragments with molecular formulas. This is done with statistically profound combinatorial optimization. CSI:FingerID is seamlessly integrated. It predicts a compound’s molecular fingerprint and searches it in a structure database. This allows for the identification of molecules which are not present in any mass spectral library.
CSI:FingerID enables excellent automated analysis and eases time-consuming manual interpretation.
To benefit from CSI:FingerID’s structure search please contact us.
What is SIRIUS+CSI:FIngerID?
SIRIUS+CSI:FingerID greatly facilitate structure elucidation of small molecules — such as metabolites — measured by tandem mass spectrometry. Both are based on cutting edge academical research and offers superb performance.
SIRIUS is an open-source software which annotates measured compounds and their corresponding fragments with molecular formulas. This is done with statistically profound combinatorial optimization. CSI:FingerID is seamlessly integrated. It predicts a compound’s molecular fingerprint and searches it in a structure database. This allows for the identification of molecules which are not present in any mass spectral library.
CSI:FingerID enables excellent automated analysis and eases time-consuming manual interpretation.
To benefit from CSI:FingerID’s structure search please contact us.
Based on cutting edge research
SIRIUS 4, our software framework which integrates all steps for structure elucidation, has been published in Nature Methods. CSI:FingerID was published in PNAS and has been cited several hundred times. SIRIUS and CSI:FingerID are the result of many years of research which was published among others in Bioinformatics, the Journal of Cheminformatics and presented on leading Bioinformatics conferences RECOMB and ISMB.
Users all over the world
CSI:FingerID is free for academic use and enjoys great popularity in the metabolomics community. Multiple million queries are submitted and processed every year.
Best method in independent evaluation
SIRIUS+CSI:FingerID is proofed to be the best computational method to identify molecules from tandem mass spectrometry data by winning the CASMI contest for structure identification in 2016 and 2017 in category 2 (automatic structure identification)
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