Bringing structure to your spectra.

Profound algorithms and state-of-the-art machine learning meet enterprise software solutions for your metabolomics MS/MS analysis.

How it works

This figure describes the type of software products the Bright Giant GmbH offers. The customer provides high resolution MS/MS data from various samples. This data will then be processed with the advanced algorithms provided by the Bright Giant GmbH to make new biolocical, chemical and medical discoveries such as microbiom analysis, network analysis, drug discovery or biomarker discovery.

Solutions

CSI:FingerID - SaaS offering with private resources

Get your own CSI:FingerID hosting with the computational power that fits your needs:

  • get started almost immediately
  • private CPU cores exclusively for your jobs.
  • scalable computing resources
  • your data will be processed on our servers

CSI:FingerID - dedicated server in your private network

Get your own dedicated ready-to-run CSI:FingerID server for use in your internal network:

  • keep your data within your internal network
  • the scaling of computing resources requires new hardware
  • configuration and delivery time required 

Customized CSI:FingerID solutions

Get your personalized structure elucidation workflow including:

  • CSI:FingerID trained on your reference spectral libraries
  • custom fingerprint models
  • custom tailored workflows and reporting

For further information, detailed offerings and pricing:

This figure describes the structure elucidation workflow with SIRIUS and CSI:FingerID. SIRIUS is run locally on your computer. It offers a seamless interface to the CSI:FingerID provided as a service from the Bright Giant GmbH. This services offer access to the compute cluster with CSI:FingerID and molecular structure databases.

What is SIRIUS+CSI:FIngerID?

SIRIUS+CSI:FingerID greatly facilitate structure elucidation of small molecules — such as metabolites — measured by tandem mass spectrometry. Both are based on cutting edge academical research and offers superb performance.

SIRIUS is an open-source software which annotates measured compounds and their corresponding fragments with molecular formulas. This is done with statistically profound combinatorial optimization. CSI:FingerID is seamlessly integrated. It predicts a compound’s molecular fingerprint and searches it in a structure database. This allows for the identification of molecules which are not present in any mass spectral library.
CSI:FingerID enables excellent automated analysis and eases time-consuming manual interpretation.

To benefit from CSI:FingerID’s structure search please contact us.

What is SIRIUS+CSI:FIngerID?

SIRIUS+CSI:FingerID greatly facilitate structure elucidation of small molecules — such as metabolites — measured by tandem mass spectrometry. Both are based on cutting edge academical research and offers superb performance.

SIRIUS is an open-source software which annotates measured compounds and their corresponding fragments with molecular formulas. This is done with statistically profound combinatorial optimization. CSI:FingerID is seamlessly integrated. It predicts a compound’s molecular fingerprint and searches it in a structure database. This allows for the identification of molecules which are not present in any mass spectral library.
CSI:FingerID enables excellent automated analysis and eases time-consuming manual interpretation.

To benefit from CSI:FingerID’s structure search please contact us.

This figure describes the structure elucidation workflow with SIRIUS and CSI:FingerID. SIRIUS is run locally on your computer. It offers a seamless interface to the CSI:FingerID provided as a service from the Bright Giant GmbH. This services offer access to the compute cluster with CSI:FingerID and molecular structure databases.

Based on cutting edge research

SIRIUS 4, our software framework which integrates all steps for structure elucidation, has been published in Nature Methods. CSI:FingerID was published in PNAS and has been cited several hundred times. SIRIUS and CSI:FingerID are the result of many years of research which was published among others in Bioinformatics, the Journal of Cheminformatics and presented on leading Bioinformatics conferences RECOMB and ISMB.

Users all over the world

CSI:FingerID is free for academic use and enjoys great popularity in the metabolomics community. Multiple million queries are submitted and processed every year. 

Best method in independent evaluation

SIRIUS+CSI:FingerID is proofed to be the best computational method to identify molecules from tandem mass spectrometry data by winning the CASMI contest for structure identification in 2016 and 2017 in category 2 (automatic structure identification)